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ebi.ac.uk
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Definitions (628)
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protein domain
Within the InterPro resources a protein family is defined as distinct functional, structural or sequence units that may exist in a variety of biological contexts. A match to an InterPro entry of this [..]
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secondary database
Secondary databases comprise data derived from the results of analysing primary data. They are often referred to as curated databases but this is a bit of a misnomer as primary databases are also cura [..]
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canonical sequence
Refers to a sequence of DNA, RNA or amino acids that reflects the most common choice of base or amino acid at each position. To reduce redundancy, the UniProtKB/Swiss-Prot policy is to describe all th [..]
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ega
European Genome-phenome Archive. A repository for genotype experiments, including information such as population and family studies. http://www.ebi.ac.uk/ega/page.php
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gap penalty
When a sequence alignment is scored, gaps in the alignment caused by insertions or deletions are given a negative score or gap penalty.
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heterosis
A genetic phenomenon that describes the effects of the improved or increased function of any biological quality due to selective breeding to generate offsprings that are genetically superior to their [..]
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methylation
Methylation is the addition of a methyl group to a substrate or the substitution of an atom, or group, by a methyl group. You can find out more about methylation on the Wikipedia page: http://en.wikip [..]
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psi-blast
PSI-BLAST (Position-Specific Iterative Basic Local Alignment Search Tool) derives a position-specific scoring matrix (PSSM) from the multiple sequence alignment of sequences detected above a given sco [..]
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psicquic
PSICQUIC is a project led by the HUPO Proteomics Standard Initiative (HUPO-PSI) that aims to standardise programmatic access to molecular interaction databases. A single query can access multiple data [..]
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pubmed
PubMed is a search engine offering access to the MEDLINE database. A free and searchable repository of scientific citations across multiple journals and books, housed at the NCBI. http://www.ncbi.nlm. [..]
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